I suggest integrating small hand movements and grips to get her habituated to it. While interacting with her, slide your hand under her belly so she gets used to the sensation. If she doesn’t mind that, pick her up a few centimeters off the ground and put her down gently. If it’s a time where she just jumps out of your hand at the sensation, don’t force it and just re-visit later. Repeated attempts in rapid succession can freak a rabbit out very easily.
The two most important items for pick-up training is: 1) making sure you always dictate when they hit the ground and 2) making sure it’s associated positively.
1) If your rabbit is flailing to escape, when you put them down, I’d pet them gently and in place, as an indication of a safe landing. When Wick seems less than happy with being picked up and scurries out when he sees the ground, the go to phrase is “You know I always put you down safely!”. Make sure you adhere to that phrase, because if a rabbit associates being put down with “I can only get down if I flail and jump out”, that’s bad. You want the rabbit to associate you as the dictator of safe landing; not the rabbit.
2) If you do have a bad pick-up set, or even a really good one, I’d just give you rabbit a pet of reassurance afterwards, letting them know they did well.
I will add the caveat that I’m not too experienced with getting a hesitant rabbit comfortable with being picked up. As compared to other BB members, I’m definitely in the minority with handling their rabbit. I pick Wick up all the time.
The answers provided in this discussion are for general guideline purposes only. The information is not intended to diagnose or treat your pet. Seek the advice of your veterinarian or a qualified behaviorist.