Hi @poxsevod!
Unfortunately, as you said, most bunnies hate being held. Mine is also very snugly and loves to be pet, but he can be a total nightmare when we have to pick him up, only the vet manages to do it without him freaking out. I can give some suggestions, though.
The first one comes from our vet. She said that bunnies hate to have their paws in the air, so you must hold his legs with your palm when you hold him. Maybe that will make the experience more comfortable.
Second, reward him after you have had to hold him with food or extra attention. My friend -a long time bunny lover- mentioned this to me a few weeks ago. Her bun still hates it but he doesn’t scratch her anymore. You will need to be patient, though…
Finally, try to limit the amount of times you have to pick him up. Lure him into the house with food instead of picking him up (we do that with our bunny and it works). This may take more effort but the rabbit will feel more at ease around you and probably bit less next time you pick him up. Also, it makes for hilarious situations: I have a few pictures of my husband on all fours dragging a huge pellet bag through the corridor
.