It’s probably best to keep the kitty out of your room and keep an eye on Hercules outside of your room until he is neutered, unless you can keep an eye on him. The more incidents that you can prevent between your cat and your bunny the better. Some cats are very forgiving of past grievances, but others are not… we’ve had our share of both over the years… and either way, being attacked by something does hurt your trust towards it in the future.
The big thing here seems to be that Hercules thinks that both you and your bedroom belong to him; so when the kitty enters the scene or gets attention from you, it’s an unintentional challenge to Hercules so he becomes defensive/aggressive. Does that make sense?
I see no reason as to why they can’t be friends after “the snip,” but it’s best to limit their interactions to the positive ones that they still have outside of your room. That way, that’s the only impression they are leaving on each other, and not making Hercules feel like he needs to defend HIS territory by attacking the cat.
Some benefits of neutering, that you may let your parents know, if they don’t know already:
-litter habits improve (less poops missing the box, less or no-more pee/spray outside the box)
-the “oniony” smell goes away
-aggression decreases
-it’s easier to teach tricks or house rules without the hormones
-no more humping people.
-prevents the possibility of reproductive cancers that are common in bunnies
Even though it’s unfortunate that they want to wait to neuter him, it’s understandable; as they may not have it in their budget at the moment anyway. It is good that they are willing to neuter him by the end of the year, though. 