The problem with my rabbits is that they also had previous health issues that they were dealing with. Rucy had a jaw abscess, and Bailey has ecuniculi. The stress of bonding ended (because they were not bonding very easily – month after month after month with little progress – that this ended up doing more damage to their health.
For Rucy, she did also become depressed. She is a spunky independent girl with a definite opinion. She became more shy and much less opinionated and spunky. I didn’t want to take that away from her just because Bailey wanted to boss her around all day. 
Some rabbits do sulk, sit in their cages, stop eating etc. For me, Rucy would still eat and explore, she just became much more low key and less active.
It is normal for bunnies to get stressed out and sulk sometimes during bonding, but it became a long term thing with Rucy (months). And she would be completely different when she didn’ t have to deal with Bailey.